python3-screed

short nucleotide read sequence utils in Python 3

Screed parses FASTA and FASTQ files, generates databases, and lets you query these databases. Values such as sequence name, sequence description, sequence quality, and the sequence itself can be retrieved from these databases.

mytop

top like query monitor for MySQL

Mytop is a console-based tool for monitoring queries and the performance of MySQL. It supports version 3.22.x, 3.23.x, 4.x and 5.x servers. It's written in Perl and support connections using TCP/IP and UNIX sockets.

libparanamer-java

Java library to access method parameter names at runtime

Paranamer is a library that allows the parameter names of non-private methods and constructors to be accessed at runtime. Normally this information is dropped by the compiler. With the advent of advanced scripting languages and web action frameworks for the Java Virtual Machine it is of increasing importance to be able to leverage a method's parameter names. Scripting languages like Groovy & JRuby, web action frameworks like Waffle and VRaptor and the compelling Grails as well as SOAP and REST designs could also benefit.

python3-invocations

Reusable Invoke tasks - Python 3.x

Invocations is a collection of reusable "Invoke" tasks/task modules, including (but not limited to) Python project management tools such as documentation building and dependency organization.

libfreehep-graphicsio-emf-java

FreeHEP Enhanced Metafile Format Driver

The Vector Graphics package of the FreeHEP Java Library enables any Java program to export to a variety of vector graphics formats as well as bitmap image formats. Among the vector formats are Encapsulated PostScript (EPS), Portable Document Format (PDF), Enhanced Meta Format (EMF), Scalable Vector Graphics (SVG), and Flash (SWF), while the image formats include GIF, PNG, JPG and PPM.

libstring-glob-permute-perl

Expand {foo,bar,baz}[2-4] style string globs

String::Glob::Permute provides a way to expand strings via glob-like notations and return a list of all possible permutations.