ssake
genomics application for assembling millions of very short DNA sequences
The Short Sequence Assembly by K-mer search and 3′ read Extension
(SSAKE) is a genomics application for aggressively assembling
millions of short nucleotide sequences by progressively searching for
perfect 3′-most k-mers using a DNA prefix tree. SSAKE is designed to
help leverage the information from short sequences reads by
stringently clustering them into contigs that can be used to
characterize novel sequencing targets.
mcstas-manuals
Neutron ray-trace simulation - documentation
McStas is a tool for carrying out Monte Carlo ray-tracing simulations
of neutron scattering instruments with high complexity and
precision. The simulations can compute all aspects of the performance
of instruments and can thus be used to optimize the use of existing
equipment, design new instrumentation, and carry out virtual
experiments for e.g. training, experimental planning or data
analysis.
python3-plumbum
library for writing shell script-like programs in Python 3
python-plumbum provides shell-like syntax and handy shortcuts for writing shell
script one-liners in Python using shell combinators. It supports local and
remote command execution (over SSH), local and remote file-system paths,
easy working-directory and environment manipulation and a programmatic
Command-Line Interface (CLI) application toolkit.
puppet-module-swift
Puppet module for OpenStack Swift
Puppet lets you centrally manage every important aspect of your system using a
cross-platform specification language that manages all the separate elements
normally aggregated in different files, like users, cron jobs, and hosts,
along with obviously discrete elements like packages, services, and files.
pkg-js-tools
collection of tools to aid packaging Node modules in Debian
The Debian JavaScript Maintainers work on packaging JavaScript libraries
for Debian. This collection contains tools which help the tam with
day-to-day work.
puppet-module-tempest
Puppet module for OpenStack Tempest
Puppet lets you centrally manage every important aspect of your system using a
cross-platform specification language that manages all the separate elements
normally aggregated in different files, like users, cron jobs, and hosts,
along with obviously discrete elements like packages, services, and files.