unicycler

hybrid assembly pipeline for bacterial genomes

Unicycler is an assembly pipeline for bacterial genomes. It can assemble Illumina-only read sets where it functions as a SPAdes-optimiser. It can also assembly long-read-only sets (PacBio or Nanopore) where it runs a miniasm+Racon pipeline. For the best possible assemblies, give it both Illumina reads and long reads, and it will conduct a hybrid assembly.

hdf5-filter-plugin-blosc-serial

blocking, shuffling and lossless compression library

This package contains a filter for HDF5 that uses the Blosc compressor. By installing this filter, you can read and write HDF5 files with Blosc-compressed datasets.

planarity

Program for planarity-related graph algorithms

This package contains a command-line reference implementation of the Edge Addition Planarity Algorithm, which is the best linear-time method to embed a planar graph and isolate planarity obstructions.

libdd-opentracing0

Datadog OpenTracing C++ Client (lib)

An OpenTracing client to collect OpenTracing data in a format that can be parsed locally by Datadog's agent. This is used as a plugin in conjunction with lib-opentracing1 in applications that support OpenTracing.

libanyevent-websocket-client-perl

Perl WebSocket client for AnyEvent

AnyEvent::WebSocket::Client provides an interface to interact with a web server that provides services via the WebSocket protocol in an AnyEvent context. It uses Protocol::WebSocket rather than reinventing the wheel. You could use AnyEvent and Protocol::WebSocket directly if you wanted finer grain control, but if that is not necessary then this class may save you some time.

errands

Simple tasks app for GNOME

Errands is a todo app for those who prefer simplicity. It can optionally sync with a CalDAV or NextCloud server.