libghc-gi-gdk-prof

GDK bindings; profiling libraries

Bindings for GDK, autogenerated by haskell-gi.

libgloo-cuda-0

Collective communications library (shared object)

Gloo is a collective communications library. It comes with a number of collective algorithms useful for machine learning applications. These include a barrier, broadcast, and allreduce.

python3-django-filters

filter Django QuerySets based on user selections (Python3)

Django-filter is a generic, reusable application to alleviate some of the more mundane bits of view code. Specifically allowing the users to filter down a queryset based on a model’s fields and displaying the form to let them do this.

smrtanalysis

software suite for single molecule, real-time sequencing

SMRT® Analysis is a powerful, open-source bioinformatics software suite available for analysis of DNA sequencing data from Pacific Biosciences’ SMRT technology. Users can choose from a variety of analysis protocols that utilize PacBio® and third-party tools. Analysis protocols include de novo genome assembly, cDNA mapping, DNA base-modification detection, and long-amplicon analysis to determine phased consensus sequences.

python3-torch-cuda

Tensors and Dynamic neural networks in Python (Python Interface)

PyTorch is a Python package that provides two high-level features:

sift

predicts if a substitution in a protein has a phenotypic effect

SIFT is a sequence homology-based tool that sorts intolerant from tolerant amino acid substitutions and predicts whether an amino acid substitution in a protein will have a phenotypic effect. SIFT is based on the premise that protein evolution is correlated with protein function. Positions important for function should be conserved in an alignment of the protein family, whereas unimportant positions should appear diverse in an alignment.