ruby-rgfa

parse, edit and write GFA format graphs in Ruby

The Graphical Fragment Assembly (GFA) format is a proposed file format to describe the product of a genome sequence assembly process. rgfa implements the proposed specifications for the GFA format described under https://github.com/pmelsted/GFA-spec/blob/master/GFA-spec.md as closely as possible. The library allows one to create an RGFA object from a file in the GFA format or from scratch, to enumerate the graph elements (segments, links, containments, paths and header lines), to traverse the graph (by traversing all links outgoing from or incoming to a segment), to search for elements (e.g. which links connect two segments) and to manipulate the graph (e.g. to eliminate a link or a segment or to duplicate a segment distributing the read counts evenly on the copies).

libnss-lwres

NSS module for using bind9's lwres as a naming service

This package provides a Name Service Switch module that allows bind9's lightweight resolver to act as a name service. It is intended to replace the Name Service Switch module that uses the bind4/bind8 resolver for name service lookups.

libnss-mysql-bg

NSS module for using MySQL as a naming service

libnss-mysql-bg provides a Name Service Switch module that allows MySQL to act as a name service.

libnxcl-bin

NX X compression client library---runtime

NX provides a differential X compression system for X11.

ruby-rspec-junit-formatter

RSpec JUnit XML formatter

RSpec results that your continuous integration service can read. This is made possible by storing output in XML format.

ruby-rspec-set

#set(), speed-up your specs

#set() is a helper for RSpec which setup active record objects before all tests and restore them to their original state before each test.