ruby-rgfa
parse, edit and write GFA format graphs in Ruby
The Graphical Fragment Assembly (GFA) format is a proposed file format
to describe the product of a genome sequence assembly process.
rgfa implements the proposed specifications for the GFA format
described under https://github.com/pmelsted/GFA-spec/blob/master/GFA-spec.md
as closely as possible.
The library allows one to create an RGFA object from a file in the GFA format
or from scratch, to enumerate the graph elements (segments, links,
containments, paths and header lines), to traverse the graph (by
traversing all links outgoing from or incoming to a segment), to search for
elements (e.g. which links connect two segments) and to manipulate the
graph (e.g. to eliminate a link or a segment or to duplicate a segment
distributing the read counts evenly on the copies).
libnss-lwres
NSS module for using bind9's lwres as a naming service
This package provides a Name Service Switch module that allows bind9's
lightweight resolver to act as a name service. It is intended to replace the
Name Service Switch module that uses the bind4/bind8 resolver for name service
lookups.
libnss-mysql-bg
NSS module for using MySQL as a naming service
libnss-mysql-bg provides a Name Service Switch module that allows MySQL
to act as a name service.
libnxcl-bin
NX X compression client library---runtime
NX provides a differential X compression system for X11.
ruby-rspec-junit-formatter
RSpec JUnit XML formatter
RSpec results that your continuous integration service can read. This is made
possible by storing output in XML format.
ruby-rspec-set
#set(), speed-up your specs
#set() is a helper for RSpec which setup active record objects before all
tests and restore them to their original state before each test.