andi
Efficient Estimation of Evolutionary Distances
This is the andi program for estimating the evolutionary distance
between closely related genomes. These distances can be used to rapidly
infer phylogenies for big sets of genomes. Because andi does not compute
full alignments, it is so efficient that it scales even up to thousands
of bacterial genomes.
javacc5
Parser generator for use with Java
Java Compiler-Compiler (JavaCC) is (according to sun)
"the most popular parser generator" for use with Java [tm]
applications.
libisospec++2
Isotopic fine structure calculator (C++ runtime)
IsoSpec implements an algorithm for fast computation of isotopologues of
chemical substances that can alternate between joint probability and peak
height threshold.
libboost-signals1.63.0
managed signals and slots library for C++
gcc-8-multilib-mipsisa32r6el-linux-gnu
GNU C compiler (multilib support) (cross compiler for mipsr6el architecture)
libghmm1
General Hidden-Markov-Model library
The General Hidden Markov Model Library (GHMM) is a C library with
additional Python3 bindings implementing a wide range of types of
Hidden Markov Models and algorithms: discrete, continuous emissions,
basic training, HMM clustering, HMM mixtures.