kallisto-examples
near-optimal RNA-Seq quantification (example data)
Kallisto is a program for quantifying abundances of transcripts from
RNA-Seq data, or more generally of target sequences using high-throughput
sequencing reads. It is based on the novel idea of pseudoalignment for
rapidly determining the compatibility of reads with targets, without the
need for alignment. On benchmarks with standard RNA-Seq data, kallisto
can quantify 30 million human reads in less than 3 minutes on a Mac
desktop computer using only the read sequences and a transcriptome index
that itself takes less than 10 minutes to build. Pseudoalignment of
reads preserves the key information needed for quantification, and
kallisto is therefore not only fast, but also as accurate than existing
quantification tools. In fact, because the pseudoalignment procedure is
robust to errors in the reads, in many benchmarks kallisto significantly
outperforms existing tools.
libisc-export1100
Exported ISC Shared Library
libipset3
library for IP sets
IP sets are a framework inside the Linux 2.4.x and 2.6.x kernel which can be
administered by the ipset(8) utility. Depending on the type, currently an
IP set may store IP addresses, (TCP/UDP) port numbers or IP addresses with
MAC addresses in a way which ensures lightning speed when matching an
entry against a set.
libpulse-mainloop-glib0
PulseAudio client libraries (glib support)
PulseAudio, previously known as Polypaudio, is a sound server for POSIX and
WIN32 systems. It is a drop in replacement for the ESD sound server with
much better latency, mixing/re-sampling quality and overall architecture.
libroscpp0d
Robot OS client library
libtest-www-mechanize-catalyst-perl
module for automated testing for Catalyst applications
Test::WWW::Mechanize::Catalyst is a Perl module that combines the well-known
Test::WWW::Mechanize module with the power of Catalyst. It allows developers
to easily test their Catalyst applications without starting up a web server;
in fact, this module works by passing the HTTP request object directly to
Catalyst.