Python Image Tool can be used to visualise analysis of data in microscopy (STM, SSM, optics), ARPES, XRD, or other multidimensional datasets on regularly gridded coordinates.

A client implementation of Secure Socket Tunneling Protocol (SSTP) for Linux / Mac OS-X that allows remote access via SSTP VPN to Microsoft Windows 2008 Server. It does so by tunneling PPP data over SSL.

A client implementation of Secure Socket Tunneling Protocol (SSTP) for Linux / Mac OS-X that allows remote access via SSTP VPN to Microsoft Windows 2008 Server. It does so by tunneling PPP data over SSL.

Writing interfaces to command line software is cumbersome. 'cmdfun' provides a framework for building function calls to seamlessly interface with shell commands by allowing lazy evaluation of command line arguments. 'cmdfun' also provides methods for handling user-specific paths to tool installs or secrets like API keys. Its focus is to equally serve package builders who wish to wrap command line software, and to help analysts stay inside R when they might usually leave to execute non- R software.

lamassemble merges overlapping "long" DNA reads into a consensus sequence (i.e. assembles them). It works OK when the number of reads is less than a thousand or so. The merging is not always accurate. In particular, if the reads come from huge tandem repeats, wrong parts of the reads may get merged.

XRayTracer is a python software library for ray tracing and wave propagation in x-ray regime. It is primarily meant for modeling synchrotron sources, beamlines and beamline elements. Includes a GUI for creating a beamline and interactively viewing it in 3D.