r-bioc-delayedmatrixstats

Functions on Rows and Columns of 'DelayedMatrix' Objects

A port of the 'matrixStats' API for use with DelayedMatrix objects from the 'DelayedArray' package. High-performing functions operating on rows and columns of DelayedMatrix objects, e.g. col / rowMedians(), col / rowRanks(), and col / rowSds(). Functions optimized per data type and for subsetted calculations such that both memory usage and processing time is minimized.

r-bioc-biomart

GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)

In recent years a wealth of biological data has become available in public data repositories. Easy access to these valuable data resources and firm integration with data analysis is needed for comprehensive bioinformatics data analysis. biomaRt provides an interface to a growing collection of databases implementing the BioMart software suite (http://www.biomart.org). The package enables retrieval of large amounts of data in a uniform way without the need to know the underlying database schemas or write complex SQL queries. Examples of BioMart databases are Ensembl, COSMIC, Uniprot, HGNC, Gramene, Wormbase and dbSNP mapped to Ensembl. These major databases give biomaRt users direct access to a diverse set of data and enable a wide range of powerful online queries from gene annotation to database mining.
munin plugin for monitoring btrfs filesystems

munin-plugins-btrfs

munin plugin for monitoring btrfs filesystems

This munin plugin uses the Python btrfs module to retrieve information about disk space allocation and usage.

python3-btrfs

Python module to inspect an online btrfs filesystem

The primary goal of this module is to be able to inspect the internals of a mounted, online, filesystem for educational purposes.

libreoffice-writer2latex

Writer/Calc to LaTeX converter extension for LibreOffice

Writer2LaTeX is a java utility to convert OpenOffice.org/LibreOffice documents – in particular documents containing formulas – into other formats. It is actually a collection of four converters, i.e.: 1) Writer2LaTeX converts documents into LaTeX 2e format for high quality typesetting. 2) Writer2BibTeX extracts bibliographic data from a document and stores it in BibTeX format (works together with Writer2LaTeX). 3) Writer2xhtml converts documents into XHTML 1.0 or XHTML 1.1+MathML 2.0 with CSS2. 4) Calc2xhtml is a companion to Writer2xhtml that converts Calc documents to XHTML 1.0 with CSS2 to display your spreadsheets on the web.

python3-junitparser

Manipulates JUnit/xUnit Result XML files

junitparser is a JUnit/xUnit result XML Parser. Use it to parse and manipulate existing Result XML files, or create new JUnit/xUnit result XMLs from scratch.