r-bioc-delayedmatrixstats
Functions on Rows and Columns of 'DelayedMatrix' Objects
A port of the 'matrixStats' API for use with DelayedMatrix objects
from the 'DelayedArray' package. High-performing functions operating on rows
and columns of DelayedMatrix objects, e.g. col / rowMedians(),
col / rowRanks(), and col / rowSds(). Functions optimized per data type and
for subsetted calculations such that both memory usage and processing time is
minimized.
r-bioc-biomart
GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
In recent years a wealth of biological data has become available in
public data repositories. Easy access to these valuable data resources
and firm integration with data analysis is needed for comprehensive
bioinformatics data analysis. biomaRt provides an interface to a growing
collection of databases implementing the BioMart software suite
(http://www.biomart.org). The package enables retrieval of large amounts
of data in a uniform way without the need to know the underlying
database schemas or write complex SQL queries. Examples of BioMart
databases are Ensembl, COSMIC, Uniprot, HGNC, Gramene, Wormbase and
dbSNP mapped to Ensembl. These major databases give biomaRt users direct
access to a diverse set of data and enable a wide range of powerful
online queries from gene annotation to database mining.
munin-plugins-btrfs
munin plugin for monitoring btrfs filesystems
This munin plugin uses the Python btrfs module to retrieve information about
disk space allocation and usage.
python3-btrfs
Python module to inspect an online btrfs filesystem
The primary goal of this module is to be able to inspect the internals of a
mounted, online, filesystem for educational purposes.
libreoffice-writer2latex
Writer/Calc to LaTeX converter extension for LibreOffice
Writer2LaTeX is a java utility to convert OpenOffice.org/LibreOffice
documents – in particular documents containing formulas – into other
formats. It is actually a collection of four converters, i.e.:
1) Writer2LaTeX converts documents into LaTeX 2e format for high quality
typesetting.
2) Writer2BibTeX extracts bibliographic data from a document and stores it in
BibTeX format (works together with Writer2LaTeX).
3) Writer2xhtml converts documents into XHTML 1.0 or XHTML 1.1+MathML 2.0 with
CSS2.
4) Calc2xhtml is a companion to Writer2xhtml that converts Calc documents
to XHTML 1.0 with CSS2 to display your spreadsheets on the web.
python3-junitparser
Manipulates JUnit/xUnit Result XML files
junitparser is a JUnit/xUnit result XML Parser. Use it to parse and manipulate
existing Result XML files, or create new JUnit/xUnit result XMLs from scratch.