snap-aligner
Scalable Nucleotide Alignment Program
SNAP is a new sequence aligner that is 3-20x faster and just as accurate as
existing tools like BWA-mem, Bowtie2 and Novoalign. It runs on commodity x86
processors, and supports a rich error model that lets it cheaply match reads
with more differences from the reference than other tools. This gives SNAP up
to 2x lower error rates than existing tools (in some cases) and lets it match
larger mutations that they may miss. SNAP also natively reads BAM, FASTQ, or
gzipped FASTQ, and natively writes SAM or BAM, with built-in sorting,
duplicate marking, and BAM indexing.
node-wikibase-sdk
functions to query Wikibase instances
JavaScript utility functions to query a Wikibase instance and simplify the
returned results.
r-cran-ggfortify
GNU R data visualization tools for statistical analysis results
Unified plotting tools for statistics commonly used, such as GLM,
time series, PCA families, clustering and survival analysis. The package offers
a single plotting interface for these analysis results and plots in a unified
style using 'ggplot2'.
raku-file-find
Get a lazy list of a directory tree
This Raku module allows you to get the contents of a given directory,
recursively, depth first.
node-configurable-http-proxy
configurable-on-the-fly HTTP Proxy in Node.js
configurable-http-proxy (CHP) provides you with a way to update and
manage a proxy table using a command line interface or REST API. It
is a simple wrapper around node-http-proxy. node-http-proxy is an
HTTP programmable proxying library that supports websockets and is
suitable for implementing components such as reverse proxies and load
balancers. By wrapping node-http-proxy, configurable-http-proxy
extends this functionality to JupyterHub deployments.
tomcat10-admin
Apache Tomcat 10 - Servlet and JSP engine -- admin web applications
Apache Tomcat implements the Java Servlet and the JavaServer Pages (JSP)
specifications from Oracle, and provides a "pure Java" HTTP web
server environment for Java code to run.