salmon
wicked-fast transcript quantification from RNA-seq data
Salmon is a wicked-fast program to produce a highly-accurate, transcript-level
quantification estimates from RNA-seq data. Salmon achieves is accuracy and
speed via a number of different innovations, including the use of lightweight
alignments (accurate but fast-to-compute proxies for traditional read
alignments) and massively-parallel stochastic collapsed variational inference.
The result is a versatile tool that fits nicely into many different pipelines.
For example, you can choose to make use of the lightweight alignments by
providing Salmon with raw sequencing reads, or, if it is more convenient, you
can provide Salmon with regular alignments (e.g. computed with your favorite
aligner), and it will use the same wicked-fast, state-of-the-art inference
algorithm to estimate transcript-level abundances for your experiment.
libtumbler-1-0
library for tumbler, a D-Bus thumbnailing service
Tumbler is a D-Bus service for applications to request thumbnails for various
URI schemes and MIME types. It is an implementation of the thumbnail management
D-Bus specification described on http://live.gnome.org/ThumbnailerSpec.
openmpi-bin
high performance message passing library -- binaries
Open MPI is a project combining technologies and resources from several other
projects (FT-MPI, LA-MPI, LAM/MPI, and PACX-MPI) in order to build the best
MPI library available. A completely new MPI-3.1 compliant implementation, Open
MPI offers advantages for system and software vendors, application developers
and computer science researchers.
gccgo-14-multilib-mipsisa64r6el-linux-gnuabi64
GNU Go compiler (multilib support) (cross compiler for mips64r6el architecture)
This is the GNU Go compiler, which compiles Go on platforms supported
by the gcc compiler.
gitaly-installer
Git RPC service for handling all the git calls made by GitLab
Gitaly makes the git data storage tier of large GitLab instances fast.
This is achieved by moving git operations as close to the data as possible and
Optimizing git services using caching.
Gitaly is a core service of gitlab.
This package installs Gitaly from pre-built binaries from Gitlab artifacts.
rbd-nbd
NBD-based rbd client for the Ceph distributed file system
Ceph is a massively scalable, open-source, distributed
storage system that runs on commodity hardware and delivers object,
block and file system storage. This is a
NBD-based client that allows one to map Ceph rbd images as local
block device.