libstdgpu-openmp0d

Efficient STL-like Data Structures on the GPU (OpenMP CPU backend)

stdgpu is an open-source library providing several generic GPU data structures for fast and reliable data management. Multiple platforms such as CUDA, OpenMP, and HIP are supported allowing you to rapidly write highly complex agnostic and native algorithms that look like sequential CPU code but are executed in parallel on the GPU.

elpa-elscreen

Screen for Emacsen

This Emacs Lisp enables you to have multiple screens (window-configuration) on your Emacsen, just like GNU screen does on the shell environment.

libace-flreactor-7.1.3

ACE-GUI reactor integration for FLTK

Recognizing the need to write reactor-based GUI applications, the ACE community has created several reactor extensions for use with X Window System. Each of these extends the ACE_Select_Reactor to work with a specific toolkit. By using these reactors, your GUI application can remain single threaded yet still respond to both GUI events, such as button presses, and your own application events.

libace-7.1.3

C++ network programming framework

This package contains the ADAPTIVE Communication Environment (ACE) framework.

libbiojava1.9-java

Java API to biological data and applications (version 1.9)

This package presents the Open Source Java API to biological databases and a series of mostly sequence-based algorithms. The APIs are not compatible between versions. In analogy to the dealing with shared libraries of the C language, the jar file of this package has the API version in its name. It is symbolically linked to the expected biojava.jar filename in the package libbiojava-java. This will help keeping multiple versions of the biojava API in parallel.

pyfastx

fast random access to sequences from FASTA/Q file - command

The pyfastx is a lightweight Python C extension that enables users to randomly access to sequences from plain and gzipped FASTA/Q files. This module aims to provide simple APIs for users to extract sequence from FASTA and reads from FASTQ by identifier and index number. The pyfastx will build indexes stored in a sqlite3 database file for random access to avoid consuming excessive amount of memory. In addition, the pyfastx can parse standard (sequence is spread into multiple lines with same length) and nonstandard (sequence is spread into one or more lines with different length) FASTA format.