python-pbcommand

common command-line interface for Pacific Biosciences analysis modules

To integrate with the pbsmrtpipe workflow engine, one must to be able to generate a Tool Contract and to be able to run from a Resolved Tool Contract. A Tool Contract contains the metadata of the exe, such as the file types of inputs, outputs and options. There are two principal use cases, first wrapping/calling Python functions that have been defined in external Python packages, or scripts. Second, creating a CLI tool that supports emitting tool contracts, running resolved tool contracts and complete argparse-style CLI.

ruby-rb-inotify

Ruby wrapper for Linux's inotify, using FFI

This Ruby library is a simple wrapper over inotify, a Linux kernel subsystem that acts to extend filesystems to notice changes to the filesystem, and report those changes to applications.

piler

genomic repeat analysis

PILER (Parsimonious Inference of a Library of Elementary Repeats) searches a genome sequence for repetitive elements. It implements search algorithms that identify characteristic patterns of local alignments induced by certain classes of repeats.

libuid-wrapper

UID wrapper library

This is a wrapper for the user, group and hosts NSS API that can simulate uid switching as a regular user. This is useful for testsuites that run as a regular user but need to test privileged functions.

safe-vdash

node dashboard for the Safe Network

vdash is a terminal based dashboard for monitoring Autonomi Network nodes.

libgcc1-ppc64-cross

GCC support library (ppc64)

Shared version of the support library, a library of internal subroutines that GCC uses to overcome shortcomings of particular machines, or special needs for some languages.