libotbstatistics-6.6-1
ORFEO Toolbox library - OTBStatistics
libdevel-callchecker-perl
custom op checking attached to subroutines
Devel::CallChecker makes some new features of the Perl 5.14.0 C API
available to XS modules running on older versions of Perl.
The features are centred around the function cv_set_call_checker,
which allows XS code to attach a magical annotation
to a Perl subroutine,
resulting in resolvable calls to that subroutine
being mutated at compile time by arbitrary C code.
This module makes cv_set_call_checker
and several supporting functions available.
(It is possible to achieve the effect of cv_set_call_checker
from XS code on much earlier Perl versions,
but it is painful to achieve without the centralised facility.)
art-nextgen-simulation-tools-profiles
profiles for art simulation tools
ART is a set of simulation tools to generate synthetic next-generation
sequencing reads. ART simulates sequencing reads by mimicking real
sequencing process with empirical error models or quality profiles
summarized from large recalibrated sequencing data. ART can also
simulate reads using user own read error model or quality profiles. ART
supports simulation of single-end, paired-end/mate-pair reads of three
major commercial next-generation sequencing platforms: Illumina's
Solexa, Roche's 454 and Applied Biosystems' SOLiD. ART can be used to
test or benchmark a variety of method or tools for next-generation
sequencing data analysis, including read alignment, de novo assembly,
SNP and structure variation discovery. ART was used as a primary tool
for the simulation study of the 1000 Genomes Project . ART is
implemented in C++ with optimized algorithms and is highly efficient in
read simulation. ART outputs reads in the FASTQ format, and alignments
in the ALN format. ART can also generate alignments in the SAM
alignment or UCSC BED file format. ART can be used together with genome
variants simulators (e.g. VarSim) for evaluating variant calling tools
or methods.
quagga-ospfd
OSPF routing daemon
GNU Quagga is free software which manages TCP/IP based routing protocols.
It supports BGP4, BGP4+, OSPFv2, OSPFv3, IS-IS, RIPv1, RIPv2, and RIPng as
well as the IPv6 versions of these.
libgphobos76-mips64-cross
Phobos D standard library (runtime library)
This is the Phobos standard library that comes with the D2 compiler.