sumatra

fast and exact comparison and clustering of sequences

With the development of next-generation sequencing, efficient tools are needed to handle millions of sequences in reasonable amounts of time. Sumatra is a program developed by the LECA. Sumatra aims to compare sequences in a way that is fast and exact at the same time. This tool has been developed to be adapted to the type of data generated by DNA metabarcoding, i.e. entirely sequenced, short markers. Sumatra computes the pairwise alignment scores from one dataset or between two datasets, with the possibility to specify a similarity threshold under which pairs of sequences that have a lower similarity are not reported. The output can then go through a classification process with programs such as MCL or MOTHUR.

libplplot-ada1-dev

Ada support for PLplot, a plotting library (development files)

node-emojis-list

complete list of standard emojis

This module provides a complete list of standard Unicode Hex Character Code that represent emojis.

libmoox-role-cloneset-perl

Perl Moo role for creating updated copies of immutable objects

MooX::Role::CloneSet is a role for immutable objects, providing an easy way to create a new object with some modified properties. It provides the cset() method that creates a new object with the specified changes, shallowly copying all the rest of the original object's properties.

php5.6-mysql

MySQL module for PHP

php5.6-bz2

bzip2 module for PHP