libitm1-loong64-cross

GNU Transactional Memory Library

GNU Transactional Memory Library (libitm) provides transaction support for accesses to the memory of a process, enabling easy-to-use synchronization of accesses to shared memory by several threads.

libstdc++-14-dev-loong64-cross

GNU Standard C++ Library v3 (development files) (loong64)

This package contains the headers and static library files necessary for building C++ programs which use libstdc++.

libstdc++6-loong64-cross

GNU Standard C++ Library v3 (loong64)

This package contains an additional runtime library for C++ programs built with the GNU compiler.

libtsan2-loong64-cross

ThreadSanitizer -- a Valgrind-based detector of data races (runtime)

ThreadSanitizer (Tsan) is a data race detector for C/C++ programs. The Linux and Mac versions are based on Valgrind.

libsundials-ida7

differential-algebraic system solver (SUNDIALS library)

This package contains the library for differential-algebraic system (IDA) solver from SUNDIALS (SUite of Nonlinear and DIfferential/ALgebraic equation Solvers).

yaha

find split-read mappings on single-end queries

yaha is an open source, flexible, sensitive and accurate DNA aligner designed for single-end reads. It supports three major modes of operation: * The default “Optimal Query Coverage” (-OQC) mode reports the best set of alignments that cover the length of each query. * Using “Filter By Similarity” (-FBS), along with the best set of alignments, yaha will also output alignments that are highly similar to an alignment in the best set. * Finally, yaha can output all the alignments found for each query. The -OQC and -FBS modes are specifically tuned to form split read mappings that can be used to accurately identify structural variation events (deletions, duplications, insertions or inversions) between the subject query and the reference genome.