python3-setuptools-protobuf

Setuptools protobuf extension plugin

Plugin for setuptools that adds support for compiling protobuf to Python files.

muscle3

multiple alignment program of protein sequences

MUSCLE is a multiple alignment program for protein sequences. MUSCLE stands for multiple sequence comparison by log-expectation. In the authors tests, MUSCLE achieved the highest scores of all tested programs on several alignment accuracy benchmarks, and is also one of the fastest programs out there.

libgenomicsdb-java

sparse array storage library for genomics (Java library)

GenomicsDB is built on top of a htslib fork and an internal array storage system for importing, querying and transforming variant data. Variant data is sparse by nature (sparse relative to the whole genome) and using sparse array data stores is a perfect fit for storing such data.

libstarpu-contrib-1.3-9

Task scheduler for heterogeneous multicore machines

StarPU is a runtime system that offers support for heterogeneous multicore machines. While many efforts are devoted to design efficient computation kernels for those architectures (e.g. to implement BLAS kernels on GPUs or on Cell's SPUs), StarPU not only takes care of offloading such kernels (and implementing data coherency across the machine), but it also makes sure the kernels are executed as efficiently as possible.

python3-aiohttp-retry

Simple aiohttp retry client

This package provides aiohttp-retry - the python3 library extending aiohttp with retry support.

libunix-errno-ocaml

errno variant that includes a variety of constructors

An errno variant similar to Unix.error but including POSIX 2008, Linux, OS X, and FreeBSD constructors. A macro definition type is also provided in order to transport a specific errno-integer map as is the case with FUSE or 9p2000.u. The types and their functions reside in Errno and are independent of any Unix bindings. This makes the library's types usable from MirageOS on top of Xen.