texmacs-texmf

WYSIWYG scientific text editor using TeX fonts -- TeXMF

GNU TeXmacs is a free scientific text editor, which was both inspired by the TeX typesetting program and the GNU Emacs editor.

genimage

Image Creation Tool

genimage is a tool to generate multiple filesystem and flash/disk images from a given root filesystem tree. It also supports creating flash/disk images out of different file-system images and files.

python3-zigpy-xbee

Python library to interface with XBee radios using the zigpy library

This library facilitates the integration of XBee modules with various home automation systems, especially Home Assistant, via the Zigbee Home Automation standard. It supports a range of Digi XBee radio modules and allows for configurations through UART connections. Users can manage their XBee devices within their Zigbee networks to control a wide array of compatible Zigbee smart devices.

flye

de novo assembler for single molecule sequencing reads using repeat graphs

Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The package represents a complete pipeline: it takes raw PacBio / ONT reads as input and outputs polished contigs. Flye also has a special mode for metagenome assembly.

gap-congruence

GAP Congruence - Congruence subgroups of SL(2,Integers)

GAP is a system for computational discrete algebra, with particular emphasis on Computational Group Theory. GAP provides a programming language, a library of thousands of functions implementing algebraic algorithms written in the GAP language as well as large data libraries of algebraic objects. GAP is used in research and teaching for studying groups and their representations, rings, vector spaces, algebras, combinatorial structures, and more.

libgromacs9

GROMACS molecular dynamics sim, shared libraries

GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles.