theseus-examples

superimpose macromolecules using maximum likelihood (examples)

Theseus is a program that simultaneously superimposes multiple macromolecular structures. Theseus finds the optimal solution to the superposition problem using the method of maximum likelihood. By down-weighting variable regions of the superposition and by correcting for correlations among atoms, the ML superposition method produces very accurate structural alignments.

texvc

validates and converts LaTeX expressions into HTML, MathML or PNG

libjimfs-java

In-memory file system implementing the java.nio.file APIs

Jimfs is an in-memory file system for Java 7 and above, implementing the java.nio.file abstract file system APIs. Jimfs supports almost all the APIs under java.nio.file. It supports:

libcassie1

library implementating search algorithms

python3-mpld3

D3 viewer for matplotlib

mpld3 brings together Matplotlib, the popular Python-based graphing library, and D3js, the popular Javascript library for creating interactive data visualizations for the web. The result is a simple API for exporting your matplotlib graphics to HTML code which can be used within the browser, within standard web pages, blogs, or tools such as the IPython notebook.

python3-django-stronghold

Python3 Django app to make all views default login_required

Stronghold is a very small and easy to use Django app that makes all your Django project default to require login for all of your views. This is the Python3 package