binutils-gold-sparc64-linux-gnu

gold ELF linker for the sparc64-linux-gnu target (deprecated)

Gold is intended to have complete support for ELF and to run as fast as possible on modern systems. For normal use it is a drop-in replacement for the older GNU linker.
boot manager for EFI-based computers

refind

boot manager for EFI-based computers

A graphical boot manager for EFI- and UEFI-based computers, such as all Intel-based Macs and recent (most 2011 and later) PCs. rEFInd presents a boot menu showing all the EFI boot loaders on the EFI-accessible partitions, and optionally BIOS-bootable partitions on Macs and BIOS boot entries on UEFI PCs with CSMs. EFI-compatible OSes, including Linux, provide boot loaders that rEFInd can detect and launch. rEFInd can launch Linux EFI boot loaders such as ELILO, GRUB Legacy, GRUB 2, and 3.3.0 and later kernels with EFI stub support. EFI filesystem drivers for ext2/3/4fs, ReiserFS, Btrfs, NTFS, HFS+, and ISO-9660 enable rEFInd to read boot loaders from these filesystems, too. rEFInd's ability to detect boot loaders at runtime makes it very easy to use, particularly when paired with Linux kernels that provide EFI stub support.

r-bioc-s4vectors

BioConductor S4 implementation of vectors and lists

The S4Vectors package defines the Vector and List virtual classes and a set of generic functions that extend the semantic of ordinary vectors and lists in R. Package developers can easily implement vector-like or list-like objects as concrete subclasses of Vector or List. In addition, a few low-level concrete subclasses of general interest (e.g. DataFrame, Rle, and Hits) are implemented in the S4Vectors package itself (many more are implemented in the IRanges package and in other Bioconductor infrastructure packages).

r-bioc-tcgabiolinksgui.data

Data for the TCGAbiolinksGUI package

Supporting data for the GNU R TCGAbiolinksGUI package. This package contains the following objects: - For gene annotation: - gene.location.hg38 - gene.location.hg19 - For Glioma Classifier function: - glioma.gcimp.model - glioma.idh.model - glioma.idhmut.model - glioma.idhwt.model - For linkedOmics database: - linkedOmicsData

r-bioc-tximport

transcript-level estimates for biological sequencing

Imports transcript-level abundance, estimated counts and transcript lengths, and summarizes into matrices for use with downstream gene-level analysis packages. Average transcript length, weighted by sample-specific transcript abundance estimates, is provided as a matrix which can be used as an offset for different expression of gene-level counts.

r-bioc-zlibbioc

(Virtual) zlibbioc Bioconductor package

zlibbioc provides the zlib library to the Bioconductor environment. This is useless on Debian because zlib is packaged. So, to avoid to patch all Bioconductor packages which required zlibbioc, zlibbioc is packaged as an empty shell depending on zlib1g-dev.