proalign

Probabilistic multiple alignment program

ProAlign performs probabilistic sequence alignments using hidden Markov models (HMM). It includes a graphical interface (GUI) allowing to (i) perform alignments of nucleotide or amino-acid sequences, (ii) view the quality of solutions, (iii) filter the unreliable alignment regions and (iv) export alignments to other software.

mtbl-bin

immutable sorted string table library (utilities)

mtbl is a C library implementation of the Sorted String Table (SSTable) data structure, based on the SSTable implementation in the open source Google LevelDB library. An SSTable is a file containing an immutable mapping of keys to values. Keys are stored in sorted order, with an index at the end of the file allowing keys to be located quickly.

python3-progressbar

text progress bar library for Python (Python 3)

A text progress bar is typically used to display the progress of a long running operation, providing a visual cue that processing is underway.

libextutils-typemap-perl

ExtUtils::Typemap - Read/Write/Modify Perl/XS typemap files

ExtUtils::Typemap exists merely as a compatibility wrapper around ExtUtils::Typemaps. In a nutshell, ExtUtils::Typemap was renamed to ExtUtils::Typemaps because the Typemap directory in lib/ could collide with the typemap file on case-insensitive file systems.

linux-doc-6.0

Linux kernel specific documentation for version 6.0

This package provides the various README files and HTML documentation for the Linux kernel version 6.0. Plenty of information, including the descriptions of various kernel subsystems, filesystems, driver-specific notes and the like. An index to the documentation is installed as /usr/share/doc/linux-doc-6.0/html/index.html.

ulogd2-sqlite3

SQLite 3 extension to ulogd

ulogd is an advanced netfilter logging daemon. It can act as a replacement for syslog for logging netfilter ruleset violations (via the NFLOG or ULOG iptables targets), can gather per-connection accounting using NFCT, or gather per-rule accounting using NFACCT. Output can be sent to plain text log files, a variety of SQL database formats, XML files, pcap files, syslog, and many other formats.