scmxx
Exchange data with Siemens mobile phones
SCMxx is a console program that allows you to exchange certain types of
data with mobile phones made by Siemens. Some of the data types that can
be exchanged are logos, ring tones, vCalendars, phonebook entries, and
SMS messages. It works with the S25, S35i, M35i and C35i, SL45, S45 and
ME45 and probably others.
indigo-utils
Organic Chemistry Toolkit Utilities
Indigo is a C++ based organic chemistry and cheminformatics software
environment. Features Include:
brig
BLAST Ring Image Generator
BRIG can display circular comparisons between a large number of genomes,
with a focus on handling genome assembly data.
* Images show similarity between a central reference sequence and other
sequences as concentric rings.
* BRIG will perform all BLAST comparisons and file parsing automatically
via a simple GUI.
* Contig boundaries and read coverage can be displayed for draft genomes;
customized graphs and annotations can be displayed.
* Using a user-defined set of genes as input, BRIG can display gene
presence, absence, truncation or sequence variation in a set of
complete genomes, draft genomes or even raw, unassembled sequence data.
* BRIG also accepts SAM-formatted read-mapping files enabling genomic
regions present in unassembled sequence data from multiple samples to
be compared simultaneously
python3-shapely
geometric objects, predicates, and operations (Python 3)
Shapely is a package for manipulation and analysis of 2D features.
Its capabilities include:
* calculating the point set unions, intersections, or differences of features
* predicate tests on features: intersects, touches, contains, and more.
gap-core
GAP computer algebra system, core components
GAP is a system for computational discrete algebra, with particular emphasis
on Computational Group Theory. GAP provides a programming language, a library
of thousands of functions implementing algebraic algorithms written in the GAP
language as well as large data libraries of algebraic objects. GAP is used in
research and teaching for studying groups and their representations, rings,
vector spaces, algebras, combinatorial structures, and more.
pyfai
Fast Azimuthal Integration scripts
PyFAI is a Python library for azimuthal integration; it allows the conversion
of diffraction images taken with 2D detectors like CCD cameras into X-Ray
powder patterns that can be used by other software like Rietveld refinement
tools (i.e. FullProf), phase analysis or texture analysis.