libcod-cif-parser-yapp-perl
error-correcting CIF parser - pure Perl implementation
ess
Transition Package, ess to elpa-ess
The ESS addon package for Emacs has been elpafied. This dummy package
helps ease transition from ess to elpa-ess.
fortunes-eo-ascii
Collection of esperanto fortunes (ascii encoding).
Datumbazo kun esperantlingvaj mesagxoj por la fortune programo.
Enhavas mesagxojn el Proverbaro Esperanta de Zamenhof,
en ASCII (post-x) kodo.
gff2aplot
pair-wise alignment-plots for genomic sequences in PostScript
A program to visualize the alignment of two genomic sequences together with
their annotations. From GFF-format input files it produces PostScript figures
for that alignment.
The following menu lists many features of gff2aplot:
* Comprehensive alignment plots for any GFF-feature. Attributes are defined
separately so you can modify only whatsoever attributes for a given file or
share same customization across different data-sets.
* All parameters are set by default within the program, but it can be also
fully configured via gff2ps-like flexible customization files. Program can
handle several of such files, summarizing all the settings before producing
the corresponding figure. Moreover, all customization parameters can be set
via command-line switches, which allows users to play with those parameters
before adding any to a customization file.
* Source order is taken from input files, if you swap file order you can
visualize alignment and its annotation with the new input arrangement.
* All alignment scores can be visualized in a PiP box below gff2aplot area,
using grey-color scale, user-defined color scale or score-dependent
gradients.
* Scalable fonts, which can also be chosen among the basic PostScript default
fonts. Feature and group labels can be rotated to improve readability in
both annotation axes.
* The program is still defined as a Unix filter so it can handle data from
files, redirections and pipes, writing output to standard-output and
warnings to standard error.
* gff2aplot is able to manage many physical page formats (from A0 to A10, and
more -see available page sizes in its manual-), including user-defined ones.
This allows, for instance, the generation of poster size genomic maps, or
the use of a continuous-paper supporting plotting device, either in portrait
or landscape.
* You can draw different alignments on same alignment plot and distinguish
them by using different colors for each.
* Shape dictionary has been expanded, so that further feature shapes are now
available (see manual).
* Annotation projections through alignment plots (so called ribbons) emulate
transparencies via complementary color fill patterns. This feature allows
one to show color pseudo-blending when horizontal and vertical ribbons
overlap.
ocamlwc
count the lines of code and comments in OCaml sources
ocamlwc is a program to count the number of lines of code and documentation
in OCaml sources. It assumes the files to be lexically well-formed.
erlang-base-hipe
Erlang/OTP HiPE enabled virtual machine and base applications
This package contains the Erlang/OTP runtime implementation, which is
configured and built with HiPE support (allows compiling to native code),
and minimal set of Erlang applications:
compiler - compiles Erlang code to byte-code;
erts - the Erlang runtime system application;
kernel - code necessary to run the Erlang runtime system itself;
ose - code for Enea OSE operating system;
sasl - the system architecture support libraries application;
stdlib - modules for manipulating lists, strings, files etc.