r-bioc-deseq

GNU R differential gene expression analysis

BioConductor package to estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution.

r-cran-kmsurv

data sets for GNU R from Klein and Moeschberger (1997), Survival Analysis

Data sets and functions for Klein and Moeschberger (1997), "Survival Analysis, Techniques for Censored and Truncated Data", Springer.

libdvdread8

library for reading DVDs

libdvdread provides the functionality that is required to access many DVDs. It parses IFO files, reads NAV-blocks, and performs CSS authentication and descrambling.

libopencl-clang10

thin wrapper for clang

r-bioc-nanostringqcpro

processing and QA for NanoString mRNA expression data

NanoStringQCPro provides a set of quality metrics that can be used to assess the quality of NanoString mRNA gene expression data -- i.e. to identify outlier probes and outlier samples. It also provides different background subtraction and normalization approaches for this data. It outputs suggestions for flagging samples/probes and an easily sharable html quality control output.

r-bioc-mutationalpatterns

GNU R comprehensive genome-wide analysis of mutational processes

This BioConductor package provides an extensive toolset for the characterization and visualization of a wide range of mutational patterns in base substitution catalogs.