snippy-examples
rapid haploid variant calling and core genome alignment (examples)
Snippy finds SNPs between a haploid reference genome and your NGS
sequence reads. It will find both substitutions (snps) and
insertions/deletions (indels). It will use as many CPUs as you can give
it on a single computer (tested to 64 cores). It is designed with speed
in mind, and produces a consistent set of output files in a single
folder. It can then take a set of Snippy results using the same
reference and generate a core SNP alignment (and ultimately a
phylogenomic tree).
libqtsql4-perl
perl bindings for the Qt Sql library
nodm
automatic display manager
This package prepares the system to automatically start an X session at
system boot. It is meant for devices like smartphones, but can be used on
a regular computer as well, if the security implications are acceptable.
php5-pspell
pspell module for php5
This package provides a module for pspell functions in PHP scripts.
python-argvalidate
simple argument validator library
python-argvalidate provides developers with a simple way of doing
type-checking for both Python functions and methods.
python-sendfile
Python interface to sendfile(2)
Python library which provides a "zero-copy" way of copying data from one
file descriptor to another (a socket). The phrase "zero-copy" refers to
the fact that all of the copying of data between the two descriptors is
done entirely by the kernel, with no copying of data into userspace buffers.
This is particularly useful when sending a file over a socket (e.g. FTP).