gsort

sort genomic data

gsort is a tool to sort genomic files according to a genomefile. For example, to sort VCF to have order: X, Y, 2, 1, 3, ... and the header needs to be kept at the top.

hsmwiz

Easy handling of NitroKey HSM USB Smard Card

HSMWiz is a frontend for OpenSC to ease handling of the NitroKey HSM USB smart card. It might work with other smart cards as well, I'm not certain. Basically, it is just boilerplate that does nothing more than what is already described in the excellent OpenSC tutorial (https://github.com/OpenSC/OpenSC/wiki/SmartCardHSM) for the Smart Card HSM. However, there's some annoying issues with that -- multiple tools are needed (pkcs11-tool, pkcs15-tool, sc-hsm-tool, OpenSSL) and output formats are sometimes not very user friendly (e.g., public keys are exported as binary DER blobs instead of PEM files). So I wrote this little frontend to encapsulate common tasks a bit. The hardware this was develped with is the NitroKey HSM, which is a quite affordable smart-card based USB HSM.

libintervalstorej-java

Java implementation of the Nested Containment List data structure

NCList provides efficient lookup of intervals overlapping a given range in time O(M log N) where N is the number of intervals stored, and M the number of overlaps found.

postgresql-13-pgl-ddl-deploy

Transparent DDL replication for PostgreSQL

Automated DDL deployment using PgLogical for PostgreSQL 13.

vtk9-examples

VTK examples

The Visualization Toolkit (VTK) is an open-source software system for 3D computer graphics, image processing, and visualization.

libuhd4.3.0-dpdk-tests

universal hardware driver for Ettus Research products - DPDK tests

Network tests for the Universal Hardware Driver for Ettus Research products.