sibsim4
align expressed RNA sequences on a DNA template
The SIBsim4 project is based on sim4, which is a program designed to align
an expressed DNA sequence with a genomic sequence, allowing for introns.
SIBsim4 is a fairly extensive rewrite of the original code with the following
goals:
* speed improvement;
* allow large, chromosome scale, DNA sequences to be used;
* provide more detailed output about splice types;
* provide more detailed output about polyA sites;
* misc code cleanups and fixes.
sidplay
Music player for tunes from C64 and C128 (console)
This is a simple music player for C64 and C128 tunes, also known as
SID tunes.
sortmail
simple mail sorter
Sortmail is a simple mail sorter you can use in your .forward to sort
your mail into folders automatically, delete unwanted mail, etc.
dino-im
modern XMPP client
Dino is a modern XMPP/Jabber client with a nice and clean look.
It does support OMEMO and OpenPGP for end-to-end encryption
and encrypted audio/video calls between two or more people.
If you are looking for a Conversations look-alike, this
program might be for you.
tkgate
Tcl/Tk based digital circuit editor and simulator
TkGate is a digital circuit editor and simulator with a Tcl/Tk based
interface. TkGate includes a large number of built-in devices including basic
gates, memories, ttys and modules for hierarchical design. The simulator can
be controlled either interactively or through a simulation script. Memory
contents can be loaded from files, and a microcode/macrocode compiler (gmac)
is included to create tkgate memory files from a high-level description. The
simulator supports continuous simulation, single step simulation (by clock or
epoch) and breakpoints. Save files are in a Verilog-like format.
siggen
Waveform generation tools
a set of tools for imitating a laboratory Signal Generator,
generating audio signals out of Linux's /dev/dsp audio device. There
is support for mono and/or stereo and 8 or 16 bit samples. The tools
include: