pdb2pqr
Preparation of protein structures for electrostatics calculations
PDB2PQR is a Python software package that automates many of the common
tasks of preparing structures for continuum electrostatics calculations.
It thus provides a platform-independent utility for converting protein files
in PDB format to PQR format. These tasks include:
* Adding a limited number of missing heavy atoms to biomolecular structures
* Determining side-chain pKas
* Placing missing hydrogens
* Optimizing the protein for favorable hydrogen bonding
* Assigning charge and radius parameters from a variety of force fields
python3-pdb2pqr
Preparation of protein structures for electrostatics calculations
PDB2PQR is a Python software package that automates many of the common
tasks of preparing structures for continuum electrostatics calculations.
It thus provides a platform-independent utility for converting protein files
in PDB format to PQR format. These tasks include:
* Adding a limited number of missing heavy atoms to biomolecular structures
* Determining side-chain pKas
* Placing missing hydrogens
* Optimizing the protein for favorable hydrogen bonding
* Assigning charge and radius parameters from a variety of force fields
libgnuradio-vocoder3.10.1
gnuradio vocoder functions
Library of vocoder blocks, including ulaw, alaw, gsm and codec2.
Debian uses external libraries for gsm and codec2.
image-factory
Build golden Linux images
image-factory is a command line tool for building golden Linux images. It uses
virt-install to do installations via the network. The installation and
configuration of the images is done using the netinstall support from the
distributions, i.e.
internetarchive
commandline interface to archive.org
Command-line tool (`ia`) for searching, downloading and uploading
content to the Internet Archive.
libgnuradio-zeromq3.10.1
gnuradio zeromq functions
0MQ messaging library support. Provide network socket
endpoints for gnuradio data and message streams.
PUB/SUB, PUSH/PULL, REP/REQ models supported.