samtools
processing sequence alignments in SAM, BAM and CRAM formats
Samtools is a set of utilities that manipulate nucleotide sequence alignments
in the binary BAM format. It imports from and exports to the ascii SAM
(Sequence Alignment/Map) and CRAM formats, does sorting, merging and indexing,
and allows one to retrieve reads in any regions swiftly. It is designed to work
on a stream, and is able to open a BAM or CRAM (not SAM) file on a remote FTP
or HTTP server.
lib32gphobos3
Phobos D standard library (runtime library)
This is the Phobos standard library that comes with the D2 compiler.
r-cran-cliapp
create rich command line applications in GNU R
This GNU R package enables to create rich command line applications,
with colors, headings, lists, alerts, progress bars, etc. It uses CSS
for custom themes.
r-cran-areal
GNU R areal weighted interpolation
A pipeable, transparent implementation of areal weighted interpolation
with support for interpolating multiple variables in a single function call.
These tools provide a full-featured workflow for validation and estimation
that fits into both modern data management (e.g. tidyverse) and spatial
data (e.g. sf) frameworks.
pymatgen-test-files
Python Materials Genomics for materials analysis (test files)
Pymatgen (Python Materials Genomics) is a robust, open-source Python
library for materials analysis. These are some of the main features: