ukui-greeter
Lightdm greeter for UKUI
A greeter for UKUI desktop environment written by Qt5.
The greeter supports biometric authentication which is
provided by biometric-authentication service.
python3-vedo
Python module for 3D scientific visualization with VTK
A Python module for scientific visualization, analysis and animation
of 3D objects and point clouds based on VTK and numpy.
trim-galore
automate quality and adapter trimming for DNA sequencing
Trim Galore! is a wrapper script to automate quality and adapter trimming
as well as quality control, with some added functionality to remove
biased methylation positions for RRBS sequence files (for directional,
non-directional (or paired-end) sequencing). It's main features are:
* For adapter trimming, Trim Galore! uses the first 13 bp of Illumina
standard adapters ('AGATCGGAAGAGC') by default (suitable for both ends
of paired-end libraries), but accepts other adapter sequence, too
* For MspI-digested RRBS libraries, Trim Galore! performs quality and
adapter trimming in two subsequent steps. This allows it to remove
2 additional bases that contain a cytosine which was artificially
introduced in the end-repair step during the library preparation
* For any kind of FastQ file other than MspI-digested RRBS, Trim
Galore! can perform single-pass adapter- and quality trimming
* The Phred quality of basecalls and the stringency for adapter removal
can be specified individually
* Trim Galore! can remove sequences if they become too short during
the trimming process. For paired-end files Trim Galore! removes entire
sequence pairs if one (or both) of the two reads became shorter than
the set length cutoff. Reads of a read-pair that are longer than a
given threshold but for which the partner read has become too short
can optionally be written out to single-end files. This ensures that
the information of a read pair is not lost entirely if only one read
is of good quality
* Trim Galore! can trim paired-end files by 1 additional bp from the 3'
end of all reads to avoid problems with invalid alignments with Bowtie 1
* Trim Galore! accepts and produces standard or gzip compressed FastQ files
* FastQC can optionally be run on the resulting output files once
trimming has completed
llvm-16-runtime
Modular compiler and toolchain technologies, IR interpreter
LLVM is a collection of libraries and tools that make it easy to build
compilers, optimizers, just-in-time code generators, and many other
compiler-related programs.
tiled
general purpose tile map editor
Tiled is a general purpose tile map editor. It's built to be easy to use,
yet capable of catering to a host of varying game engines, whether your game
is an RPG, platformer or Breakout clone. Tiled supports plugins to read and
write map formats, in addition to its map format, to support map formats in
use by engines.
node-lezer-rust
Node.js module to provide Rust grammar for the lezer parser system
The problem of parsing structured text has resisted one-size-fits all
solutions for over 60 years. Lezer isn't such a solution either, but it is
a very decent parser generator, especially well suited for use in code
editors.