python3-backoff
Function decoration for backoff and retry
This module provides function decorators which can be used to wrap a
function such that it will be retried until some condition is met. It
is meant to be of use when accessing unreliable resources with the
potential for intermittent failures i.e. network resources and external
APIs. Somewhat more generally, it may also be of use for dynamically
polling resources for externally generated content.
r-bioc-purecn
copy number calling and SNV classification using targeted short read sequencing
This package estimates tumor purity, copy number, and loss of
heterozygosity (LOH), and classifies single nucleotide variants (SNVs) by
somatic status and clonality. PureCN is designed for targeted short read
sequencing data, integrates well with standard somatic variant detection
and copy number pipelines, and has support for tumor samples without
matching normal samples.
jags
Just Another Gibbs Sampler for Bayesian MCMC - binary
JAGS is Just Another Gibbs Sampler. It is a program for analysis of
Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC)
simulation not wholly unlike BUGS.
libdolfinx-real0.4
Shared libraries for DOLFIN
DOLFIN is the Python and C++ interface of the FEniCS project for the
automated solution of differential equations, providing a consistent
PSE (Problem Solving Environment) for solving ordinary and partial
differential equations. Key features include a simple, consistent and
intuitive object-oriented API; automatic and efficient evaluation of
variational forms; automatic and efficient assembly of linear
systems; and support for general families of finite elements.
libjira-rest-perl
thin wrapper around Jira's REST APIs
The JIRA::REST module implements thin wrappers around Jira's REST APIs:
libinih1
simple .INI file parser
inih (INI Not Invented Here) is a simple .INI file parser written in C.
It's only a couple of pages of code, and it was designed to be small and
simple, so it's good for embedded systems. It's also more or less
compatible with Python's ConfigParser style of .INI files, including
RFC 822-style multi-line syntax and name: value entries.