libmoosex-attribute-chained-perl
Moose attribute that returns the instance to allow for chaining
MooseX::Attribute::Chained is a Moose Trait which allows for method chaining
on accessors by returning $self on write/set operations.
pd-rtclib
Real Time Composition Library for Pure Data (Pd)
This software library offers the possibility to experiment with a number of
compositional techniques, such as serial procedures, permutations and
controlled randomness.
php-net-dnsbl
Checks if a given host or URL is listed on a DNSBL or SURBL
pbgenomicconsensus
Pacific Biosciences variant and consensus caller
The GenomicConsensus package provides Quiver, Pacific Biosciences'
flagship consensus and variant caller. Quiver is an algorithm that finds
the maximum likelihood template sequence given PacBio reads of the template.
These reads are modeled using a conditional random field approach that
prescribes a probability to a read given a template sequence. In addition to
the base sequence of each read, Quiver uses several additional quality value
covariates that the base caller provides.
kallisto-examples
near-optimal RNA-Seq quantification (example data)
Kallisto is a program for quantifying abundances of transcripts from
RNA-Seq data, or more generally of target sequences using high-throughput
sequencing reads. It is based on the novel idea of pseudoalignment for
rapidly determining the compatibility of reads with targets, without the
need for alignment. On benchmarks with standard RNA-Seq data, kallisto
can quantify 30 million human reads in less than 3 minutes on a Mac
desktop computer using only the read sequences and a transcriptome index
that itself takes less than 10 minutes to build. Pseudoalignment of
reads preserves the key information needed for quantification, and
kallisto is therefore not only fast, but also as accurate than existing
quantification tools. In fact, because the pseudoalignment procedure is
robust to errors in the reads, in many benchmarks kallisto significantly
outperforms existing tools.
libisc-export1100
Exported ISC Shared Library