libfilter-signatures-perl

compatibility shim for subroutine signatures

Filter::signatures implements a backwards compatibility shim for formal Perl subroutine signatures that were introduced to the Perl core with Perl 5.20.

gobjc-multilib-mips-linux-gnu

GNU Objective-C compiler for the mips architecture

This is the GNU Objective-C compiler, which compiles Objective-C on platforms supported by the gcc compiler. It uses the gcc backend to generate optimized code.

python3-denss

calculate electron density from a solution scattering profile

DENSS is an algorithm used for calculating ab initio electron density maps directly from solution scattering data. DENSS implements a novel iterative structure factor retrieval algorithm to cycle between real space density and reciprocal space structure factors, applying appropriate restraints in each domain to obtain a set of structure factors whose intensities are consistent with experimental data and whose electron density is consistent with expected real space properties of particles.

sga

de novo genome assembler that uses string graphs

The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA sequence reads.

fusionforge-plugin-projects-hierarchy

FusionForge plugin - Project Hierarchy

FusionForge provides many tools to aid collaboration in a development project, such as bug-tracking, task management, mailing-lists, SCM repository, forums, support request helper, web/FTP hosting, release management, etc. All these services are integrated into one web site and managed through a web interface.

kalign

Global and progressive multiple sequence alignment

Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Muth-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment.