ruby-acts-as-tree

simple tree behaviour to active_record models

Ruby-acts-as-tree is a ruby gem that adds simple support for organizing ActiveRecord models into parent–children relationships. By default, ActsAsTree expects a foreign key column called `parent_id`.

plip

fully automated protein-ligand interaction profiler

The Protein-Ligand Interaction Profiler (PLIP) is a tool to analyze and visualize protein-ligand interactions in PDB files.

r-bioc-cummerbund

tool for analysis of Cufflinks RNA-Seq output

Allows for persistent storage, access, exploration, and manipulation of Cufflinks high-throughput sequencing data. In addition, provides numerous plotting functions for commonly used visualizations.

r-bioc-ggbio

Visualization tools for genomic data

The ggbio package extends and specializes the grammar of graphics for biological data. The graphics are designed to answer common scientific questions, in particular those often asked of high throughput genomics data. All core Bioconductor data structures are supported, where appropriate. The package supports detailed views of particular genomic regions, as well as genome-wide overviews. Supported overviews include ideograms and grand linear views. High-level plots include sequence fragment length, edge-linked interval to data view, mismatch pileup, and several splicing summaries.

fence-agents-ibmblade

Fence Agents for Red Hat Cluster - IBM BladeCenter SNMP agent

Red Hat Fence Agents is a collection of scripts to handle remote power management for several devices. They allow failed or unreachable nodes to be forcibly restarted and removed from the cluster.

fence-agents-ifmib

Fence Agents for Red Hat Cluster - IF-MIB SNMP agent

Red Hat Fence Agents is a collection of scripts to handle remote power management for several devices. They allow failed or unreachable nodes to be forcibly restarted and removed from the cluster.