mlv-smile
Find statistically significant patterns in sequences
Smile determines sequence motifs on the basis of a set of DNA, RNA or
protein sequences.
* No hard limit on the number of combinations of motifs to describe
subsets of sequences.
* The sequence alphabet may be specified.
* The use of wildcards is supported.
* Better determination of significance of motifs by simulation.
* Introduction of a set of sequences with negative controls
that should not match automatically determined motifs.
python-hypothesis
advanced Quickcheck style testing library for Python 2
Hypothesis is a library for testing your Python code against a much
larger range of examples than you would ever want to write by
hand. It's based on the Haskell library, Quickcheck, and is designed
to integrate seamlessly into your existing Python unit testing work
flow.
pyvcf
helper scripts for Variant Call Format (VCF) parser
The Variant Call Format (VCF) specifies the format of a text file used
in bioinformatics for storing gene sequence variations. The format has
been developed with the advent of large-scale genotyping and DNA
sequencing projects, such as the 1000 Genomes Project.
librte-pmd-pfe20.0
Data Plane Development Kit (librte-pmd-pfe runtime library)
librte-pmd-softnic20.0
Data Plane Development Kit (librte-pmd-softnic runtime library)
librte-pmd-virtio-crypto20.0
Data Plane Development Kit (librte-pmd-virtio-crypto runtime library)