octave-matgeom

computational geometry for Octave

This package contain a geometry toolbox for 2D/3D geometric computing in Octave, a numerical computation software. It contains several hundreds of functions for the creation and manipulation of 2D and 3D shapes such as point sets, lines, polygons, 3D meshes, ellipses, etc.

liblogforwarderutils2

Base library for LogService elements

elpa-deferred

simple asynchronous functions for Emacs Lisp

It is a simple library for asynchronous tasks.

sibelia-examples

comparative genomics tool (example data)

Sibelia (Synteny Block ExpLoration tool) is a comparative genomics tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms.

elpa-popup

visual popup user interface library for Emacs

popup.el is a visual popup user interface library for Emacs. It provides common UI widgets such as popup tooltips and popup menus.

poretools

toolkit for nanopore nucleotide sequencing data

poretools is a flexible toolkit for exploring datasets generated by nanopore sequencing devices from MinION for the purposes of quality control and downstream analysis. Poretools operates directly on the native FAST5 (a variant of the HDF5 standard) file format produced by ONT and provides a wealth of format conversion utilities and data exploration and visualization tools.