stringtie

assemble short RNAseq reads to transcripts

The abundance of transcripts in a human tissue sample can be determined by RNA sequencing. The exact sequence sampled may be random, depending on the technology used. And it may be short, i.e. shorter than the transcript. At some point, many shorter reads need to be assembled to the model the complete transcripts.

libqscintilla2-qt5-15

Qt5 port of the Scintilla source code editing widget

QScintilla is a text editor for Qt5 with features especially useful when writing and debugging source code. These include support for syntax styling, error indicators, code completion, call tips and margins.

node-snapdragon-util

Utilities for the snapdragon parser/compiler

Module containing common code for snapdragon.

python3-actionlib

Robot OS actionlib library - Python 3 interface

This package is part of Robot OS (ROS). The actionlib stack provides a standardized interface for interfacing with preemptable tasks. Examples of this include moving the base to a target location, performing a laser scan and returning the resulting point cloud, detecting the handle of a door, etc.

libapache2-mod-authn-yolo

Yolo style authentication for Apache 2

The authn_yolo module is an authentication provider for Basic Authentication in the Apache2 web server. It accepts any combination of user and password.

scoary

pangenome-wide association studies

Scoary is designed to take the gene_presence_absence.csv file from Roary as well as a traits file created by the user and calculate the associations between all genes in the accessory genome and the traits. It reports a list of genes sorted by strength of association per trait.