TM-align is a computer algorithm for protein structure alignment using dynamic programming. The scoring is performed by the TM-score rotation matrix. This is similar to the RMSD in that unaligned portions of the structure influence the scoring less than the more structurally conserved regions.

DPUSER is an interactive language capable of handling numbers (both real and complex), strings, and matrices. Its main aim is to do astronomical image analysis, for which it provides a comprehensive set of functions, but it can also be used for many other applications.

PGAPack is a general-purpose, data-structure-neutral, parallel genetic algorithm package being developed at Argonne National Laboratory.

This Graphic User Interface allows you to begin using mediawiki2latex most easily. Mediawiki2latex provides the user with a simple way of turning a page hosted on a server running MediaWiki into a high quality PDF output. The GUI runs mediawikitolatex and displays its standard and error outputs in separate graphic tabs, while maintaining a reliable progress bar.