ecopcr
estimate PCR barcode primers quality
DNA barcoding is a tool for characterizing the species origin using a
short sequence from a standard position and agreed upon position in the
genome. To be used as a DNA barcode, a genome locus should vary among
individuals of the same species only to a minor degree and it should
vary among species very quickly. From a practical point of view, a
barcode locus should be flanked by two conserved regions to design PCR
primers. Several manually discovered barcode loci like COI, rbcL, 18S,
16S and 23S rDNA, or trnH-ps are routinely used today, but no objective
function has been described to measure their quality in terms of
universality (barcode coverage, Bc ) or in terms of taxonomical
discrimination capacity (barcode specificity, Bs ).
python3-bottle
fast and simple WSGI-framework for Python 3
Bottle is a fast and simple WSGI-framework for the Python3 programming
language. It offers request dispatching with url parameter support
(routes), templates, key/value databases, a built-in HTTP server and
adapters for many third party WSGI/HTTP-server and template engines.
postgresql-17-pgq3
Generic queue for PostgreSQL
This extension provides generic queues for PostgreSQL.
eye
semantic web reasoning engine
Euler Yet another proof Engine (EYE) is a reasoning engine
supporting the Semantic Web layers.
It performs semibackward chaining and it supports Euler paths.
Via N3 it is interoperable with Cwm.
postgresql-17-pgpool2
connection pool server and replication proxy for PostgreSQL - modules
pgpool-II is a middleware that works between PostgreSQL servers and a
PostgreSQL database client. This package contains support modules for
the PostgreSQL 17 server:
postgresql-17-ip4r
IPv4 and IPv6 types for PostgreSQL 17
This PostgreSQL module provides several data types which can contain
single IPv4 or IPv6 addresses or a range of such addresses.