r-bioc-noiseq

Exploratory analysis and differential expression for RNA-seq data

Analysis of RNA-seq expression data or other similar kind of data. Exploratory plots to evualuate saturation, count distribution, expression per chromosome, type of detected features, features length, etc. Differential expression between two experimental conditions with no parametric assumptions.

binutils-gold-s390x-linux-gnu

gold ELF linker for the s390x-linux-gnu target (deprecated)

Gold is intended to have complete support for ELF and to run as fast as possible on modern systems. For normal use it is a drop-in replacement for the older GNU linker.

binutils-gold-sparc64-linux-gnu

gold ELF linker for the sparc64-linux-gnu target (deprecated)

Gold is intended to have complete support for ELF and to run as fast as possible on modern systems. For normal use it is a drop-in replacement for the older GNU linker.

r-bioc-rcwl

An R interface to the Common Workflow Language

The Common Workflow Language (CWL) is an open standard for development of data analysis workflows that is portable and scalable across different tools and working environments. Rcwl provides a simple way to wrap command line tools and build CWL data analysis pipelines programmatically within R. It increases the ease of usage, development, and maintenance of CWL pipelines.

r-bioc-s4arrays

foundation of array-like containers in Bioconductor

The S4Arrays package defines the Array virtual class to be extended by other S4 classes that wish to implement a container with an array-like semantic. It also provides: (1) low-level functionality meant to help the developer of such container to implement basic operations like display, subsetting, or coercion of their array-like objects to an ordinary matrix or array, and (2) a framework that facilitates block processing of array-like objects (typically on-disk objects).

python3-dm-tree

library for working with nested data structures (Python3 version)

A library for working with nested data structures. In a way, tree generalizes the builtin map function which only supports flat sequences, and allows one to apply a function to each "leaf" preserving the overall structure.